Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3090: 11458 - K03062 PSMC1, RPT2 26S proteasome regulatory subunit T2, at 294926 to 296826 11458 mRNA_3091: 11459 - K13303 SGK2 serum/glucocorticoid-regulated kinase 2, at 296743 to 299433 11459 mRNA_3092: 11460 - KOG4784 Uncharacterized conserved protein, at 300048 to 303992 11460 mRNA_3093: 11461 - Hypothetical Protein, at 304363 to 305282 11461 mRNA_3094: 11462 - HMMPfam-Bestrophin, RFP-TM, chloride channel-PF01062, at 305611 to 307227 11462
Group Condition mRNA_3090 mRNA_3091 mRNA_3092 mRNA_3093 mRNA_3094
11458
11459
11460
11461
11462
growth on oleic acid YNB Glucose -0.1 -0.0 -0.1 -0.0 -0.2
growth on ypd YPD -0.4 -0.1 0.1 0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 0.0 -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.1 -0.0 0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.4 0.1 0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.1 0.1 -0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.2 -0.0 0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.1 -0.1 0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.3 0.2 0.1 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.3 -0.1 0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.2 0.1 0.2 -0.1
growth on ricinoleic acid YNB Glucose 0.1 0.2 0.1 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.1 0.4 0.0 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.0 0.2 0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.1 0.3 -0.0 0.1
auxotrophy YNB Glucose 75mM Arginine 0.3 0.3 0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.5 0.1 0.1 -0.2
auxotrophy YNB Glucose 0.5 0.3 0.1 -0.0 -0.2
auxotrophy Dropout Complete 0.4 0.3 -0.1 0.1 -0.1
growth on oleic acid YNB Oleic Acid 0.4 0.1 0.1 0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.1 0.4 0.0 -0.0 0.1
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