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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3084: 11452 - Hypothetical Protein, at 282989 to 283312
11452
mRNA_3085: 11453 - K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit, at 284368 to 286217
11453
mRNA_3086: 11454 - K03136 TFIIE1, GTF2E1, TFA1, tfe transcription initiation factor TFIIE subunit alpha, at 286949 to 288955
11454
mRNA_3087: 11455 - HMMPfam-haloacid dehalogenase-like hydrolase-PF12710,SUPERFAMILY--SSF56784,TIGRFAM-HAD-SF-IB HAD phosphoserine phosphatase-like hydrolase, family IB-TIGR01488,TIGRFAM-DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase-TIGR01489, at 289552 to 290619
11455
mRNA_3088: 11456 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 290812 to 293862
11456
Group
Condition
mRNA_3084
mRNA_3085
mRNA_3086
mRNA_3087
mRNA_3088
11452
11453
11454
11455
11456
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.8
-0.2
-0.4
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.3
-0.3
0.0
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.2
-0.5
-0.4
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
-0.3
-0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
0.4
-0.3
-0.6
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.2
0.4
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.1
-0.0
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
-0.2
-0.1
-0.0
growth on ypd
YPD
-0.5
0.5
0.1
-0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.0
-0.4
-0.0
0.1
auxotrophy
YNB Glucose
-0.4
-0.0
-0.3
0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.1
-0.4
0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.0
-0.1
0.1
-0.1
growth on oleic acid
YNB Glucose
-0.1
0.2
0.1
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
0.0
0.1
-0.2
0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.1
-0.1
-0.0
0.2
auxotrophy
Dropout Complete
-0.2
0.2
-0.4
0.2
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
0.8
-0.1
-0.6
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.2
-0.0
0.3
0.1
growth on oleic acid
YNB Oleic Acid
-0.2
0.5
-0.0
0.1
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
1.0
0.0
-0.2
0.1
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