Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3081: 11449 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 274779 to 278054 11449 mRNA_3082: 11450 - K09510 DNAJB4 DnaJ homolog subfamily B member 4, at 278441 to 278932 11450 mRNA_3083: 11451 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SUPERFAMILY--SSF57959, at 281026 to 282865 11451 mRNA_3084: 11452 - Hypothetical Protein, at 282989 to 283312 11452 mRNA_3085: 11453 - K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit, at 284368 to 286217 11453
Group Condition mRNA_3081 mRNA_3082 mRNA_3083 mRNA_3084 mRNA_3085
11449
11450
11451
11452
11453
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.1 -0.0 -0.4 -0.8
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.6 -0.0 -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.7 0.1 0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.5 -0.0 -0.2 0.2
auxotrophy YNB Glucose 0.0 -0.2 -0.0 -0.4 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.3 0.0 -0.3 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 0.1 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.4 -0.0 0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.3 -0.1 -0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.3 -0.2 -0.3 -0.2
growth on ricinoleic acid YNB Glucose 0.1 -0.5 -0.0 0.0 0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 0.0 -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.2 -0.0 -0.1 0.1
growth on oleic acid YNB Glucose -0.0 -0.0 -0.0 -0.1 0.2
auxotrophy Dropout Complete -0.1 0.1 -0.0 -0.2 0.2
growth on ypd YPD 0.2 0.1 0.1 -0.5 0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.3 -0.1 -0.2 0.8
growth on oleic acid YNB Oleic Acid -0.0 0.2 -0.0 -0.2 0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.4 -0.0 -0.3 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.2 0.0 0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.1 -0.0 -0.2 1.0
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