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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3081: 11449 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 274779 to 278054
11449
mRNA_3082: 11450 - K09510 DNAJB4 DnaJ homolog subfamily B member 4, at 278441 to 278932
11450
mRNA_3083: 11451 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SUPERFAMILY--SSF57959, at 281026 to 282865
11451
mRNA_3084: 11452 - Hypothetical Protein, at 282989 to 283312
11452
mRNA_3085: 11453 - K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit, at 284368 to 286217
11453
Group
Condition
mRNA_3081
mRNA_3082
mRNA_3083
mRNA_3084
mRNA_3085
11449
11450
11451
11452
11453
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.1
-0.0
-0.4
-0.8
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.6
-0.0
-0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.7
0.1
0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.5
-0.0
-0.2
0.2
auxotrophy
YNB Glucose
0.0
-0.2
-0.0
-0.4
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-0.3
0.0
-0.3
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
0.1
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.4
-0.0
0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.3
-0.1
-0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
0.3
-0.2
-0.3
-0.2
growth on ricinoleic acid
YNB Glucose
0.1
-0.5
-0.0
0.0
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
0.0
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.2
-0.0
-0.1
0.1
growth on oleic acid
YNB Glucose
-0.0
-0.0
-0.0
-0.1
0.2
auxotrophy
Dropout Complete
-0.1
0.1
-0.0
-0.2
0.2
growth on ypd
YPD
0.2
0.1
0.1
-0.5
0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.3
-0.1
-0.2
0.8
growth on oleic acid
YNB Oleic Acid
-0.0
0.2
-0.0
-0.2
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.4
-0.0
-0.3
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.2
0.0
0.3
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.1
-0.0
-0.2
1.0
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