Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3079: 11447 - HMMPfam-DNA polymerase Ligase (LigD)-PF13298, at 270913 to 272289 11447 mRNA_3080: 11448 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 272562 to 274087 11448 mRNA_3081: 11449 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 274779 to 278054 11449 mRNA_3082: 11450 - K09510 DNAJB4 DnaJ homolog subfamily B member 4, at 278441 to 278932 11450 mRNA_3083: 11451 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SUPERFAMILY--SSF57959, at 281026 to 282865 11451
Group Condition mRNA_3079 mRNA_3080 mRNA_3081 mRNA_3082 mRNA_3083
11447
11448
11449
11450
11451
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.2 -0.1 -0.7 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 0.1 -0.6 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 0.1 0.1 -0.4 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.2 -0.0 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.0 0.0 -0.3 0.0
growth on ricinoleic acid YNB Glucose -0.2 0.3 0.1 -0.5 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.3 -0.1 -0.5 -0.0
growth on oleic acid YNB Oleic Acid -0.0 -0.3 -0.0 0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1 0.1 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.2 -0.1 0.1 -0.0
growth on oleic acid YNB Glucose 0.2 -0.1 -0.0 -0.0 -0.0
auxotrophy YNB Glucose 0.2 0.2 0.0 -0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.2 0.2 -0.1 -0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.0 0.0 0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.2 0.2 -0.0 -0.1 0.0
auxotrophy Dropout Complete 0.2 0.3 -0.1 0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.1 0.3 0.2 0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.3 0.1 0.4 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.5 0.3 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.4 0.1 0.1 -0.0
growth on ypd YPD 0.4 0.2 0.2 0.1 0.1
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