Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3077: 11445 - K07542 PIGV phosphatidylinositol glycan, class V, at 264209 to 265729 11445 mRNA_3078: 11446 - K01613 psd, PISD phosphatidylserine decarboxylase, at 265905 to 270528 11446 mRNA_3079: 11447 - HMMPfam-DNA polymerase Ligase (LigD)-PF13298, at 270913 to 272289 11447 mRNA_3080: 11448 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 272562 to 274087 11448 mRNA_3081: 11449 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 274779 to 278054 11449
Group Condition mRNA_3077 mRNA_3078 mRNA_3079 mRNA_3080 mRNA_3081
11445
11446
11447
11448
11449
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.2 -0.6 0.1 0.1
growth on oleic acid YNB Oleic Acid 0.0 -0.1 -0.0 -0.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.0 -0.3 0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.1 0.2 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 -0.2 0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.0 -0.2 -0.1 0.1
growth on oleic acid YNB Glucose -0.0 0.0 0.2 -0.1 -0.0
auxotrophy YNB Glucose -0.1 -0.1 0.2 0.2 0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 0.2 0.2 -0.1
auxotrophy Dropout Complete -0.1 -0.1 0.2 0.3 -0.1
growth on ricinoleic acid YNB Glucose 0.1 -0.0 -0.2 0.3 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.3 -0.0 -0.0 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.0 0.1 0.0 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.2 -0.3 0.3 0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.0 0.2 0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 0.2 -0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 0.2 0.4 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.2 -0.0 0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.0 0.1 0.3 -0.1
growth on ypd YPD -0.0 0.1 0.4 0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.2 0.1 0.5 0.3
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