Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3075: 11443 - K07652 vicK two-component system, OmpR family, sensor histidine kinase VicK, at 252187 to 260484 11443 mRNA_3076: 11444 - KOG4497 Uncharacterized conserved protein WDR8, contains WD repeats, at 261811 to 264179 11444 mRNA_3077: 11445 - K07542 PIGV phosphatidylinositol glycan, class V, at 264209 to 265729 11445 mRNA_3078: 11446 - K01613 psd, PISD phosphatidylserine decarboxylase, at 265905 to 270528 11446 mRNA_3079: 11447 - HMMPfam-DNA polymerase Ligase (LigD)-PF13298, at 270913 to 272289 11447
Group Condition mRNA_3075 mRNA_3076 mRNA_3077 mRNA_3078 mRNA_3079
11443
11444
11445
11446
11447
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.1 -0.2 0.2 -0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.1 0.0 0.2 -0.3
growth on oleic acid YNB Oleic Acid 0.1 -0.0 0.0 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.0 0.2 -0.0 -0.2
growth on oleic acid YNB Glucose 0.0 -0.2 -0.0 0.0 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.1 -0.0 0.0 -0.3
growth on ricinoleic acid YNB Glucose 0.2 0.0 0.1 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 -0.1 -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.2 0.0 -0.1 0.2
auxotrophy Dropout Complete 0.2 0.1 -0.1 -0.1 0.2
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.0 -0.0 -0.0 0.2
auxotrophy YNB Glucose 75mM Arginine 0.2 0.0 -0.1 -0.1 0.2
auxotrophy YNB Glucose 0.1 0.2 -0.1 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.3 -0.1 -0.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.2 0.1 0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.0 0.1 0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.2 0.1 0.0 0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 0.2 0.1 0.1 0.2
growth on ypd YPD 0.1 0.1 -0.0 0.1 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.5 0.0 0.3 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.3 0.5 0.0 0.1
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