Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_3071: 11439 - Hypothetical Protein, at 245578 to 247225 11439 mRNA_3072: 11440 - KOG1203 Predicted dehydrogenase, at 248202 to 249247 11440 mRNA_3073: 11441 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667, at 249401 to 250160 11441 mRNA_3074: 11442 - KOG4650 Predicted steroid reductase, at 250206 to 251968 11442 mRNA_3075: 11443 - K07652 vicK two-component system, OmpR family, sensor histidine kinase VicK, at 252187 to 260484 11443
Group Condition mRNA_3071 mRNA_3072 mRNA_3073 mRNA_3074 mRNA_3075
11439
11440
11441
11442
11443
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.4 -0.2 -0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 -0.4 0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.1 -0.1 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 -0.3 0.3 0.0
growth on oleic acid YNB Oleic Acid 0.1 0.2 -0.4 -0.0 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 0.1 0.2 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.1 -0.2 0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 -0.3 0.2 -0.0 0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 0.2 -0.0 0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.0 -0.0 0.1 0.0
growth on oleic acid YNB Glucose 0.1 0.2 -0.2 0.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.2 -0.2 0.3 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2 -0.0 0.5 0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 0.1 -0.1 0.1 0.2
auxotrophy Dropout Complete -0.0 0.2 -0.1 0.1 0.2
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1 0.0 0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.0 0.1 0.0 0.1
growth on ricinoleic acid YNB Glucose 0.2 -0.1 0.1 0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.1 0.1 0.1 0.3
auxotrophy YNB Glucose 0.2 0.1 -0.0 0.3 0.1
growth on ypd YPD 0.1 0.3 0.1 0.2 0.1
remove
mRNA_3071
plot
remove
mRNA_3072
plot
remove
mRNA_3073
remove
mRNA_3074
plot
remove
mRNA_3075
plot