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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3070: 11438 - Hypothetical Protein, at 242213 to 243874
11438
mRNA_3071: 11439 - Hypothetical Protein, at 245578 to 247225
11439
mRNA_3072: 11440 - KOG1203 Predicted dehydrogenase, at 248202 to 249247
11440
mRNA_3073: 11441 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667, at 249401 to 250160
11441
mRNA_3074: 11442 - KOG4650 Predicted steroid reductase, at 250206 to 251968
11442
Group
Condition
mRNA_3070
mRNA_3071
mRNA_3072
mRNA_3073
mRNA_3074
11438
11439
11440
11441
11442
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.4
-0.4
-0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.2
-0.5
-0.4
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.0
-0.3
0.2
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.0
-0.1
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
0.1
0.1
0.2
-0.4
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.0
-0.2
-0.3
0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
0.2
-0.0
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.1
0.0
-0.0
0.1
growth on ricinoleic acid
YNB Glucose
-0.2
0.2
-0.1
0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
0.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.2
-0.1
0.1
0.2
growth on oleic acid
YNB Glucose
0.1
0.1
0.2
-0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.1
0.1
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.2
0.2
-0.2
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
-0.1
0.1
-0.2
0.2
auxotrophy
Dropout Complete
0.3
-0.0
0.2
-0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.0
-0.2
-0.0
0.5
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.1
-0.1
0.0
0.2
auxotrophy
YNB Glucose
0.3
0.2
0.1
-0.0
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
0.3
-0.0
0.1
0.0
growth on ypd
YPD
0.1
0.1
0.3
0.1
0.2
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