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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3066: 11434 - K13449 PR1 pathogenesis-related protein 1, at 232396 to 233465
11434
mRNA_3067: 11435 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 235279 to 236676
11435
mRNA_3068: 11436 - K02434 gatB, PET112 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B, at 236980 to 239400
11436
mRNA_3069: 11437 - KOG2505 Ankyrin repeat protein, at 239616 to 241978
11437
mRNA_3070: 11438 - Hypothetical Protein, at 242213 to 243874
11438
Group
Condition
mRNA_3066
mRNA_3067
mRNA_3068
mRNA_3069
mRNA_3070
11434
11435
11436
11437
11438
growth on ypd
YPD
-0.2
-0.1
-0.5
-0.0
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.2
-0.0
-0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.1
-0.2
-0.0
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.4
0.4
-0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.2
0.0
0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
-0.0
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.1
0.0
-0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.2
-0.0
-0.1
0.4
growth on ricinoleic acid
YNB Glucose
-0.1
-0.1
0.2
0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.2
-0.0
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.1
-0.1
-0.2
0.2
growth on oleic acid
YNB Glucose
0.1
-0.1
0.1
0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.2
-0.2
0.3
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.1
-0.1
-0.1
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.6
-0.1
-0.2
-0.1
0.3
growth on oleic acid
YNB Oleic Acid
0.3
-0.0
0.1
0.2
0.1
auxotrophy
Dropout Complete
-0.0
0.0
0.2
0.2
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.0
0.1
0.1
0.3
auxotrophy
YNB Glucose
0.3
0.1
0.1
0.2
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.6
-0.1
-0.1
-0.1
0.5
auxotrophy
YNB Glucose 75mM Arginine
0.5
-0.0
0.2
0.2
0.2
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