Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3064: 11432 - K17617 CTDNEP1, DULLARD, NEM1 CTD nuclear envelope phosphatase 1, at 229860 to 230752 11432 mRNA_3065: 11433 - Hypothetical Protein, at 230805 to 232101 11433 mRNA_3066: 11434 - K13449 PR1 pathogenesis-related protein 1, at 232396 to 233465 11434 mRNA_3067: 11435 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 235279 to 236676 11435 mRNA_3068: 11436 - K02434 gatB, PET112 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B, at 236980 to 239400 11436
Group Condition mRNA_3064 mRNA_3065 mRNA_3066 mRNA_3067 mRNA_3068
11432
11433
11434
11435
11436
growth on ypd YPD -0.7 0.1 -0.2 -0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.2 -0.2 0.1 0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.1 -0.3 0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.1 -0.4 0.1 -0.2
auxotrophy Dropout Complete -0.5 -0.3 -0.0 0.0 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.2 -0.4 -0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.0 0.1 0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.2 -0.0 -0.4 0.4
auxotrophy YNB Glucose -0.3 -0.3 0.3 0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.1 -0.1 -0.2 0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.0 -0.1 -0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.0 -0.1 -0.1 -0.0
growth on oleic acid YNB Glucose -0.2 0.1 0.1 -0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 0.1 0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.2 0.5 -0.0 0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.0 0.3 0.0 0.1
growth on oleic acid YNB Oleic Acid 0.1 0.1 0.3 -0.0 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 -0.0 0.6 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 0.1 0.3 0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 0.1 0.6 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7 0.4 0.2 -0.1 -0.1
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