Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3063: 11431 - Hypothetical Protein, at 227293 to 229777 11431 mRNA_3064: 11432 - K17617 CTDNEP1, DULLARD, NEM1 CTD nuclear envelope phosphatase 1, at 229860 to 230752 11432 mRNA_3065: 11433 - Hypothetical Protein, at 230805 to 232101 11433 mRNA_3066: 11434 - K13449 PR1 pathogenesis-related protein 1, at 232396 to 233465 11434 mRNA_3067: 11435 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 235279 to 236676 11435
Group Condition mRNA_3063 mRNA_3064 mRNA_3065 mRNA_3066 mRNA_3067
11431
11432
11433
11434
11435
growth on ypd YPD -0.1 -0.7 0.1 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 -0.2 -0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.5 -0.2 -0.2 0.1
auxotrophy Dropout Complete -0.0 -0.5 -0.3 -0.0 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2 0.2 -0.4 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.3 -0.1 -0.3 0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 -0.0 0.1 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.3 -0.1 -0.1 -0.2
growth on ricinoleic acid YNB Glucose -0.0 -0.1 -0.0 -0.1 -0.1
growth on oleic acid YNB Glucose -0.1 -0.2 0.1 0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.4 -0.2 0.5 -0.0
auxotrophy YNB Glucose 0.2 -0.3 -0.3 0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.1 0.1 -0.4 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 -0.0 0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.1 0.0 -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.2 0.1 0.1 0.3 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.0 -0.0 0.3 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.6 -0.0 0.6 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.7 0.4 0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.7 0.1 0.3 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.5 0.1 0.6 -0.1
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