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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3044: 11412 - K11771 SWI1, ADR6 SWI/SNF chromatin-remodeling complex subunit SWI1, at 177701 to 181469
11412
mRNA_3045: 11413 - Hypothetical Protein, at 182948 to 183820
11413
mRNA_3046: 11414 - Hypothetical Protein, at 184191 to 185834
11414
mRNA_3047: 11415 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 186454 to 188264
11415
mRNA_3048: 11416 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 188658 to 190471
11416
Group
Condition
mRNA_3044
mRNA_3045
mRNA_3046
mRNA_3047
mRNA_3048
11412
11413
11414
11415
11416
growth on oleic acid
YNB Oleic Acid
-1.5
-0.0
0.2
0.0
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.7
0.2
-0.0
0.4
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.3
-0.4
-0.5
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.2
0.2
-0.1
0.4
0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.2
-0.3
-0.0
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
-0.3
-0.1
0.2
auxotrophy
Dropout Complete
-0.4
-0.1
-0.4
0.5
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.1
-0.1
-0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.4
0.4
-0.6
0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.1
-0.2
0.2
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.0
-0.2
-0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.0
-0.1
-0.1
-0.1
auxotrophy
YNB Glucose
-0.7
0.1
0.0
0.4
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.2
-0.1
-0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
-0.3
0.2
-0.2
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
0.4
-0.5
0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.3
0.2
-0.1
0.5
0.0
growth on oleic acid
YNB Glucose
-0.3
0.4
0.1
0.1
0.0
growth on ypd
YPD
0.1
0.2
-0.1
0.0
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.2
-0.1
0.0
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
0.2
0.2
0.3
-0.1
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