Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_3043: 11411 - K18159 NDUFAF1, CIA30 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1, at 175511 to 176675 11411 mRNA_3044: 11412 - K11771 SWI1, ADR6 SWI/SNF chromatin-remodeling complex subunit SWI1, at 177701 to 181469 11412 mRNA_3045: 11413 - Hypothetical Protein, at 182948 to 183820 11413 mRNA_3046: 11414 - Hypothetical Protein, at 184191 to 185834 11414 mRNA_3047: 11415 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 186454 to 188264 11415
Group Condition mRNA_3043 mRNA_3044 mRNA_3045 mRNA_3046 mRNA_3047
11411
11412
11413
11414
11415
growth on oleic acid YNB Oleic Acid   -1.5 -0.0 0.2 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid   -1.7 0.2 -0.0 0.4
ypd buoyancy 40 hrs No Buoyancy Separation   0.2 -0.3 -0.4 -0.5
ypd buoyancy 40 hrs High Buoyancy   -0.2 -0.2 -0.3 -0.0
ypd buoyancy 40 hrs Low Buoyancy   -0.2 -0.1 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid   -1.2 0.2 -0.1 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.2 -0.0 -0.2 -0.1
auxotrophy Dropout Complete   -0.4 -0.1 -0.4 0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.2 0.1 -0.1 -0.1
growth on ricinoleic acid YNB Glucose   -0.4 0.4 -0.6 0.3
auxotrophy YNB Glucose 75mM Arginine   -0.3 0.1 -0.2 0.2
ypd buoyancy 40 hrs Median Buoyancy   0.0 -0.2 -0.1 -0.1
auxotrophy YNB Glucose   -0.7 0.1 0.0 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 -0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.4 -0.3 0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine   -0.3 0.2 -0.1 0.5
growth on ypd YPD   0.1 0.2 -0.1 0.0
growth on oleic acid YNB Glucose   -0.3 0.4 0.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.2 0.2 -0.1 0.0
facs on lipid accumulation Sorted Low BODIPY Gate   0.5 0.4 -0.5 0.1
facs on lipid accumulation Sorted No BODIPY Gate   -0.0 0.2 0.2 0.3
remove
mRNA_3043
plot
remove
mRNA_3044
plot
remove
mRNA_3045
remove
mRNA_3046
plot
remove
mRNA_3047
plot