Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3041: 11409 - KOG0252 Inorganic phosphate transporter, at 168668 to 171245 11409 mRNA_3042: 11410 - KOG0252 Inorganic phosphate transporter, at 172633 to 175207 11410 mRNA_3043: 11411 - K18159 NDUFAF1, CIA30 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1, at 175511 to 176675 11411 mRNA_3044: 11412 - K11771 SWI1, ADR6 SWI/SNF chromatin-remodeling complex subunit SWI1, at 177701 to 181469 11412 mRNA_3045: 11413 - Hypothetical Protein, at 182948 to 183820 11413
Group Condition mRNA_3041 mRNA_3042 mRNA_3043 mRNA_3044 mRNA_3045
11409
11410
11411
11412
11413
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.7   -1.7 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.3   -1.2 0.2
growth on oleic acid YNB Oleic Acid -0.2 0.1   -1.5 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.3   -0.2 0.1
auxotrophy YNB Glucose 0.2 -0.2   -0.7 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.6   -0.2 -0.0
auxotrophy Dropout Complete -0.1 0.0   -0.4 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.1   -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.2   -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.1   0.2 -0.3
growth on oleic acid YNB Glucose -0.0 -0.2   -0.3 0.4
growth on ricinoleic acid YNB Glucose 0.1 -0.1   -0.4 0.4
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.0   -0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1   0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.0   -0.3 0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.3   0.2 0.2
growth on ypd YPD 0.1 -0.3   0.1 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.0   -0.0 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 -0.1   0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 -0.0   0.4 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.2   0.5 0.4
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