Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3033: 11401 - BLAST related to transcription factor medusa [Melanopsichiu..., at 143853 to 146672 11401 mRNA_3034: 11402 - K05767 IQGAP2_3 Ras GTPase-activating-like protein IQGAP2/3, at 148393 to 151658 11402 mRNA_3035: 11403 - K03661 ATPeV0B, ATP6F V-type H+-transporting ATPase 21kDa proteolipid subunit, at 151976 to 152968 11403 mRNA_3036: 11404 - Hypothetical Protein, at 153289 to 156377 11404 mRNA_3037: 11405 - Hypothetical Protein, at 156746 to 157530 11405
Group Condition mRNA_3033 mRNA_3034 mRNA_3035 mRNA_3036 mRNA_3037
11401
11402
11403
11404
11405
growth on ricinoleic acid YNB Ricinoleic Acid -1.9 0.2   0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.7 0.1   0.1 -0.1
growth on ricinoleic acid YNB Glucose -1.3 0.2   0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.6   -0.1 0.3
auxotrophy YNB Glucose -0.9 0.4   -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.5   -0.2 0.2
ypd buoyancy 40 hrs Low Buoyancy -1.1 0.3   -0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.2   0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate -1.0 0.8   -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 0.2   -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.7 0.3   0.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1   0.1 -0.0
auxotrophy Dropout Complete -0.6 0.4   0.2 -0.2
growth on oleic acid YNB Glucose -0.5 0.2   -0.1 0.2
auxotrophy YNB Glucose 75mM Methionine -0.6 0.4   0.1 -0.1
growth on ypd YPD 0.3 -0.4   0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1   0.0 0.4
growth on oleic acid YNB Oleic Acid -0.5 0.5   -0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.1   0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1   -0.2 0.3
ypd buoyancy 40 hrs High Buoyancy 0.4 0.4   -0.1 0.3
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