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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3033: 11401 - BLAST related to transcription factor medusa [Melanopsichiu..., at 143853 to 146672
11401
mRNA_3034: 11402 - K05767 IQGAP2_3 Ras GTPase-activating-like protein IQGAP2/3, at 148393 to 151658
11402
mRNA_3035: 11403 - K03661 ATPeV0B, ATP6F V-type H+-transporting ATPase 21kDa proteolipid subunit, at 151976 to 152968
11403
mRNA_3036: 11404 - Hypothetical Protein, at 153289 to 156377
11404
mRNA_3037: 11405 - Hypothetical Protein, at 156746 to 157530
11405
Group
Condition
mRNA_3033
mRNA_3034
mRNA_3035
mRNA_3036
mRNA_3037
11401
11402
11403
11404
11405
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.9
0.2
0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.7
0.1
0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-1.3
0.2
0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-0.6
-0.1
0.3
auxotrophy
YNB Glucose
-0.9
0.4
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.5
-0.2
0.2
ypd buoyancy
40 hrs Low Buoyancy
-1.1
0.3
-0.1
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.2
0.0
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
0.8
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
0.2
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.7
0.3
0.1
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
0.1
-0.0
auxotrophy
Dropout Complete
-0.6
0.4
0.2
-0.2
growth on oleic acid
YNB Glucose
-0.5
0.2
-0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.6
0.4
0.1
-0.1
growth on ypd
YPD
0.3
-0.4
0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.1
0.0
0.4
growth on oleic acid
YNB Oleic Acid
-0.5
0.5
-0.1
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.1
0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
-0.2
0.3
ypd buoyancy
40 hrs High Buoyancy
0.4
0.4
-0.1
0.3
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