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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3027: 11395 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF50729, at 130169 to 132601
11395
mRNA_3028: 11396 - Hypothetical Protein, at 132999 to 134584
11396
mRNA_3029: 11397 - K14688 SLC30A1, ZNT1 solute carrier family 30 (zinc transporter), member 1, at 134923 to 137066
11397
mRNA_3030: 11398 - Hypothetical Protein, at 137392 to 137958
11398
mRNA_3031: 11399 - KOG0527 HMG-box transcription factor, at 138430 to 140039
11399
Group
Condition
mRNA_3027
mRNA_3028
mRNA_3029
mRNA_3030
mRNA_3031
11395
11396
11397
11398
11399
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-1.0
-1.0
0.0
growth on ypd
YPD
-0.3
0.0
-0.8
-0.5
auxotrophy
Dropout Complete
-0.1
-0.3
-0.8
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.4
-1.1
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.3
-0.3
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.3
-0.2
-0.3
auxotrophy
YNB Glucose
-0.2
-0.1
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.1
-0.2
0.1
growth on ricinoleic acid
YNB Glucose
-0.1
0.2
-0.5
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.0
-0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.1
-0.4
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-0.5
-0.6
0.3
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.2
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
0.1
-0.3
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.1
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
0.1
-0.3
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.1
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.2
0.0
0.0
growth on oleic acid
YNB Glucose
-0.1
0.2
0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.4
1.6
0.2
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