Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3022: 11390 - K12394 AP1S1_2 AP-1 complex subunit sigma 1/2, at 117998 to 118989 11390 mRNA_3023: 11391 - K04709 LAG1 Acyl-CoA-dependent ceramide synthase, at 119242 to 120921 11391 mRNA_3024: 11392 - K20366 ERGIC2, ERV41 endoplasmic reticulum-Golgi intermediate compartment protein 2, at 121077 to 122686 11392 mRNA_3025: 11393 - K11354 cph1 two-component system, chemotaxis family, sensor kinase Cph1, at 123207 to 127605 11393 mRNA_3026: 11394 - Hypothetical Protein, at 128270 to 129253 11394
Group Condition mRNA_3022 mRNA_3023 mRNA_3024 mRNA_3025 mRNA_3026
11390
11391
11392
11393
11394
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.2 0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine     -0.1 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.1 -0.0 -0.2
growth on ricinoleic acid YNB Glucose     -0.3 0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.1 -0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid     -0.1 0.2 -0.3
auxotrophy YNB Glucose     0.1 -0.1 -0.2
growth on ypd YPD     -0.2 0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy     -0.2 0.2 -0.2
growth on oleic acid YNB Glucose     0.1 0.1 -0.3
growth on oleic acid YNB Oleic Acid     -0.0 0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine     -0.0 -0.0 0.0
facs on lipid accumulation Sorted Low BODIPY Gate     -0.1 0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate     -0.1 0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy     -0.0 -0.0 0.1
ypd buoyancy 40 hrs High Buoyancy     0.1 -0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate     0.0 0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy     0.2 0.1 -0.1
auxotrophy Dropout Complete     0.0 -0.0 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid     0.2 0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation     0.6 -0.1 -0.1
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