Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3012: 11380 - K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit, at 72843 to 74660 11380 mRNA_3013: 11381 - KOG1889 Putative phosphoinositide phosphatase, at 74992 to 77769 11381 mRNA_3014: 11382 - K14404 CPSF4, YTH1 cleavage and polyadenylation specificity factor subunit 4, at 78302 to 78988 11382 mRNA_3015: 11383 - KOG3252 Uncharacterized conserved protein, at 79756 to 80863 11383 mRNA_3016: 11384 - Hypothetical Protein, at 81087 to 81376 11384
Group Condition mRNA_3012 mRNA_3013 mRNA_3014 mRNA_3015 mRNA_3016
11380
11381
11382
11383
11384
facs on lipid accumulation Sorted Low BODIPY Gate -3.4     -0.0 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.7     -1.5 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5     -1.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3     -1.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4     -0.7 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5     -1.0 0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.6     0.2 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.6     -0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.5     -0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0     0.3 0.1
growth on oleic acid YNB Glucose 0.7     -0.3 0.1
growth on oleic acid YNB Oleic Acid 1.0     -0.4 0.1
growth on ricinoleic acid YNB Glucose 0.8     0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.3     0.9 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0     1.2 0.2
auxotrophy YNB Glucose 0.8     0.6 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 1.1     0.3 0.0
growth on ypd YPD -0.4     2.3 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.9     0.8 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.7     1.0 -0.1
auxotrophy Dropout Complete 0.6     1.3 -0.2
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