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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3012: 11380 - K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit, at 72843 to 74660
11380
mRNA_3013: 11381 - KOG1889 Putative phosphoinositide phosphatase, at 74992 to 77769
11381
mRNA_3014: 11382 - K14404 CPSF4, YTH1 cleavage and polyadenylation specificity factor subunit 4, at 78302 to 78988
11382
mRNA_3015: 11383 - KOG3252 Uncharacterized conserved protein, at 79756 to 80863
11383
mRNA_3016: 11384 - Hypothetical Protein, at 81087 to 81376
11384
Group
Condition
mRNA_3012
mRNA_3013
mRNA_3014
mRNA_3015
mRNA_3016
11380
11381
11382
11383
11384
facs on lipid accumulation
Sorted Low BODIPY Gate
-3.4
-0.0
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-1.5
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-1.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-1.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
-0.7
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
-1.0
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
0.2
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.6
-0.4
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
-0.0
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.3
0.1
growth on oleic acid
YNB Glucose
0.7
-0.3
0.1
growth on oleic acid
YNB Oleic Acid
1.0
-0.4
0.1
growth on ricinoleic acid
YNB Glucose
0.8
0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.9
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
1.2
0.2
auxotrophy
YNB Glucose
0.8
0.6
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.1
0.3
0.0
growth on ypd
YPD
-0.4
2.3
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.9
0.8
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.7
1.0
-0.1
auxotrophy
Dropout Complete
0.6
1.3
-0.2
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