Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3009: 11377 - Hypothetical Protein, at 65747 to 66498 11377 mRNA_3010: 11378 - K10398 KIF11, EG5 kinesin family member 11, at 66880 to 69062 11378 mRNA_3011: 11379 - K19177 NUS1 dehydrodolichyl diphosphate syntase complex subunit NUS1, at 71270 to 72413 11379 mRNA_3012: 11380 - K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit, at 72843 to 74660 11380 mRNA_3013: 11381 - KOG1889 Putative phosphoinositide phosphatase, at 74992 to 77769 11381
Group Condition mRNA_3009 mRNA_3010 mRNA_3011 mRNA_3012 mRNA_3013
11377
11378
11379
11380
11381
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.2   -3.4  
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.1   -0.6  
growth on ypd YPD -0.4 0.4   -0.4  
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.6   -0.7  
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1   -0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.3   -0.5  
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1   -0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1   0.4  
growth on oleic acid YNB Glucose -0.3 -0.1   0.7  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.1   0.3  
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.0   0.3  
growth on ricinoleic acid YNB Glucose -0.0 -0.3   0.8  
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.2   0.6  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.1   0.5  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.0   0.5  
growth on oleic acid YNB Oleic Acid -0.4 0.1   1.0  
auxotrophy Dropout Complete 0.1 0.1   0.6  
auxotrophy YNB Glucose 0.1 0.0   0.8  
auxotrophy YNB Glucose 75mM Methionine -0.1 0.3   0.7  
auxotrophy YNB Glucose 75mM Arginine -0.0 0.3   0.9  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.2   1.1  
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