Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3001: 11369 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 48202 to 49332 11369 mRNA_3002: 11370 - HMMPfam-Fungal specific transcription factor domain-PF11951, at 49376 to 50038 11370 mRNA_3003: 11371 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 50625 to 53414 11371 mRNA_3004: 11372 - K12624 LSM5 U6 snRNA-associated Sm-like protein LSm5, at 53581 to 54123 11372 mRNA_3005: 11373 - K19708 PTC6, AUP1 protein phosphatase PTC6, at 54754 to 56074 11373
Group Condition mRNA_3001 mRNA_3002 mRNA_3003 mRNA_3004 mRNA_3005
11369
11370
11371
11372
11373
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.7 -0.7   -0.7
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.5 -0.1   -2.2
growth on ypd YPD -0.4 -0.6 -0.1   0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.1 0.1   -0.5
growth on oleic acid YNB Oleic Acid 0.2 -0.3 0.1   -0.8
growth on oleic acid YNB Glucose 0.1 0.1 -0.1   -0.5
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.1 -0.1   -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.2 -0.2   0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 0.1   0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.2 0.1   -0.3
auxotrophy Dropout Complete 0.2 -0.3 -0.2   0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.2 0.3   -0.2
growth on ricinoleic acid YNB Glucose 0.0 -0.1 0.1   -0.1
auxotrophy YNB Glucose 0.2 -0.2 -0.1   0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.1 0.1   0.1
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.1 -0.1   0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.4 0.1   -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.0 0.0   0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.5 0.1   -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.1 0.2   0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.3 0.1   0.1
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