Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3000: 11368 - K15528 FAAH fatty acid amide hydrolase, at 45858 to 47909 11368 mRNA_3001: 11369 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 48202 to 49332 11369 mRNA_3002: 11370 - HMMPfam-Fungal specific transcription factor domain-PF11951, at 49376 to 50038 11370 mRNA_3003: 11371 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 50625 to 53414 11371 mRNA_3004: 11372 - K12624 LSM5 U6 snRNA-associated Sm-like protein LSm5, at 53581 to 54123 11372
Group Condition mRNA_3000 mRNA_3001 mRNA_3002 mRNA_3003 mRNA_3004
11368
11369
11370
11371
11372
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.1 -0.7 -0.7  
growth on ypd YPD -0.1 -0.4 -0.6 -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.4 -0.1 0.1  
auxotrophy Dropout Complete 0.0 0.2 -0.3 -0.2  
auxotrophy YNB Glucose 75mM Arginine -0.0 0.0 -0.1 -0.1  
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.1 -0.3 0.1  
auxotrophy YNB Glucose -0.1 0.2 -0.2 -0.1  
growth on oleic acid YNB Oleic Acid -0.0 0.2 -0.3 0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1 -0.2 -0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 0.2 0.1  
auxotrophy YNB Glucose 75mM Methionine -0.1 0.3 -0.1 -0.1  
growth on ricinoleic acid YNB Glucose -0.1 0.0 -0.1 0.1  
growth on oleic acid YNB Glucose 0.1 0.1 0.1 -0.1  
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.1 0.0 0.0  
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.2 0.4 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.3 0.2 0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.1 0.1 0.1  
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.2 0.5 -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.1 0.1 0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.2 0.3 0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.3 0.5 0.1  
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