Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2999: 11367 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 43195 to 45486 11367 mRNA_3000: 11368 - K15528 FAAH fatty acid amide hydrolase, at 45858 to 47909 11368 mRNA_3001: 11369 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 48202 to 49332 11369 mRNA_3002: 11370 - HMMPfam-Fungal specific transcription factor domain-PF11951, at 49376 to 50038 11370 mRNA_3003: 11371 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 50625 to 53414 11371
Group Condition mRNA_2999 mRNA_3000 mRNA_3001 mRNA_3002 mRNA_3003
11367
11368
11369
11370
11371
growth on ypd YPD -0.2 -0.1 -0.4 -0.6 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 0.1 0.1 -0.7 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 -0.3 -0.4 -0.1 0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 0.1 -0.1 -0.3 0.1
growth on oleic acid YNB Oleic Acid 0.0 -0.0 0.2 -0.3 0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.0 0.0 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.2 0.1 -0.2 -0.2
growth on ricinoleic acid YNB Glucose 0.1 -0.1 0.0 -0.1 0.1
auxotrophy Dropout Complete 0.5 0.0 0.2 -0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.2 -0.1 0.2 0.1
growth on oleic acid YNB Glucose 0.1 0.1 0.1 0.1 -0.1
auxotrophy YNB Glucose 0.5 -0.1 0.2 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.1 0.1 0.0 0.0
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.1 0.3 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.2 0.2 0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.2 -0.3 0.2 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.2 0.1 0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.3 0.2 0.3 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 -0.2 0.2 0.4 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.4 0.1 0.1 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.0 0.3 0.5 0.1
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