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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2999: 11367 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 43195 to 45486
11367
mRNA_3000: 11368 - K15528 FAAH fatty acid amide hydrolase, at 45858 to 47909
11368
mRNA_3001: 11369 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 48202 to 49332
11369
mRNA_3002: 11370 - HMMPfam-Fungal specific transcription factor domain-PF11951, at 49376 to 50038
11370
mRNA_3003: 11371 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 50625 to 53414
11371
Group
Condition
mRNA_2999
mRNA_3000
mRNA_3001
mRNA_3002
mRNA_3003
11367
11368
11369
11370
11371
growth on ypd
YPD
-0.2
-0.1
-0.4
-0.6
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
0.1
0.1
-0.7
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
-0.3
-0.4
-0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
0.0
0.1
-0.1
-0.3
0.1
growth on oleic acid
YNB Oleic Acid
0.0
-0.0
0.2
-0.3
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.0
0.0
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.2
0.1
-0.2
-0.2
growth on ricinoleic acid
YNB Glucose
0.1
-0.1
0.0
-0.1
0.1
auxotrophy
Dropout Complete
0.5
0.0
0.2
-0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.2
-0.1
0.2
0.1
growth on oleic acid
YNB Glucose
0.1
0.1
0.1
0.1
-0.1
auxotrophy
YNB Glucose
0.5
-0.1
0.2
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.1
0.1
0.0
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.1
0.3
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.2
0.2
0.5
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.2
-0.3
0.2
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.2
0.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
0.3
0.2
0.3
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-0.2
0.2
0.4
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.4
0.1
0.1
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.0
0.3
0.5
0.1
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