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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2997: 11365 - K14768 UTP7, WDR46 U3 small nucleolar RNA-associated protein 7, at 39217 to 41331
11365
mRNA_2998: 11366 - KOG3383 Uncharacterized conserved protein, at 41514 to 42818
11366
mRNA_2999: 11367 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 43195 to 45486
11367
mRNA_3000: 11368 - K15528 FAAH fatty acid amide hydrolase, at 45858 to 47909
11368
mRNA_3001: 11369 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 48202 to 49332
11369
Group
Condition
mRNA_2997
mRNA_2998
mRNA_2999
mRNA_3000
mRNA_3001
11365
11366
11367
11368
11369
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
0.0
-0.3
-0.4
growth on ypd
YPD
0.0
-0.2
-0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
0.3
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
0.2
0.2
-0.3
growth on ricinoleic acid
YNB Glucose
-0.1
0.1
-0.1
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
0.4
0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.0
0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.4
0.1
0.2
0.1
growth on oleic acid
YNB Glucose
-0.2
0.1
0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.2
-0.0
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.0
0.3
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
0.3
0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.2
0.4
0.1
auxotrophy
YNB Glucose
-0.2
0.5
-0.1
0.2
growth on oleic acid
YNB Oleic Acid
0.3
0.0
-0.0
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.1
0.2
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.4
-0.1
0.3
auxotrophy
Dropout Complete
-0.0
0.5
0.0
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
0.1
0.0
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.6
0.5
-0.2
0.2
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