Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2994: 11362 - K14729 FOX2 multifunctional beta-oxidation protein, at 30118 to 34295 11362 mRNA_2995: 11363 - K20290 COG3, SEC34 conserved oligomeric Golgi complex subunit 3, at 34550 to 37704 11363 mRNA_2996: 11364 - Hypothetical Protein, at 37820 to 39043 11364 mRNA_2997: 11365 - K14768 UTP7, WDR46 U3 small nucleolar RNA-associated protein 7, at 39217 to 41331 11365 mRNA_2998: 11366 - KOG3383 Uncharacterized conserved protein, at 41514 to 42818 11366
Group Condition mRNA_2994 mRNA_2995 mRNA_2996 mRNA_2997 mRNA_2998
11362
11363
11364
11365
11366
growth on oleic acid YNB Oleic Acid -1.5 0.4     0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1     -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 0.3     -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.3     -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.1     -0.3
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.1     -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1     -0.4
growth on ypd YPD -0.1 0.1     0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.0     -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.9     -0.7
growth on oleic acid YNB Glucose 0.0 0.4     -0.2
auxotrophy Dropout Complete -0.2 0.6     -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.1     0.1
growth on ricinoleic acid YNB Glucose 0.1 0.5     -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 1.1     -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.1     0.6
auxotrophy YNB Glucose 75mM Arginine -0.0 0.6     -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.3     -0.0
auxotrophy YNB Glucose 0.1 0.9     -0.2
auxotrophy YNB Glucose 75mM Methionine 0.0 0.8     -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.1     0.5
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