Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2984: 11352 - HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427, at 11630 to 12169 11352 mRNA_2985: 11353 - KOG1203 Predicted dehydrogenase, at 12654 to 13709 11353 mRNA_2986: 11354 - K19176 FAAH2 fatty acid amide hydrolase 2, at 14214 to 16255 11354 mRNA_2987: 11355 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 16356 to 17605 11355 mRNA_2988: 11356 - KOG1212 Amidases, at 17852 to 19907 11356
Group Condition mRNA_2984 mRNA_2985 mRNA_2986 mRNA_2987 mRNA_2988
11352
11353
11354
11355
11356
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.7 -0.5 0.0 -0.3
growth on ricinoleic acid YNB Glucose -0.4 -0.0 -0.2 -0.1 -0.1
auxotrophy YNB Glucose 0.1 -0.4 -0.4 -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.3 -0.5 0.1 0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.4 -0.2 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.0 -0.0 0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.1 -0.1 0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.4 -0.3 0.2 0.0
growth on oleic acid YNB Oleic Acid -0.2 -0.1 0.1 0.1 -0.1
auxotrophy Dropout Complete 0.5 -0.6 -0.1 0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 0.2 0.0 0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.1 0.4 0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.1 0.1 0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.2 0.1 0.2 -0.1
growth on oleic acid YNB Glucose 0.6 -0.4 0.3 0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.3 0.1 0.1 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.0 0.4 0.2 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.0 0.5 0.1 0.6
facs on lipid accumulation Sorted High BODIPY Gate 0.4 0.5 0.3 0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.3 0.4 0.2 0.6
growth on ypd YPD 0.3 0.5 0.5 0.3 0.2
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