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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2973: 11341 - K11996 MOCS3, UBA4 adenylyltransferase and sulfurtransferase, at 688176 to 690178
11341
mRNA_2974: 11342 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 690635 to 692698
11342
mRNA_2975: 11343 - KOG3072 Long chain fatty acid elongase, at 693422 to 694637
11343
mRNA_2976: 11344 - KOG2592 Tumor differentially expressed (TDE) protein, at 694917 to 696801
11344
mRNA_2977: 11345 - K05758 ARPC2 actin related protein 2/3 complex, subunit 2, at 697458 to 698969
11345
Group
Condition
mRNA_2973
mRNA_2974
mRNA_2975
mRNA_2976
mRNA_2977
11341
11342
11343
11344
11345
ypd buoyancy
40 hrs Low Buoyancy
-2.8
-0.1
0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-1.2
-0.4
0.2
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
0.3
-0.4
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.5
-0.0
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.2
0.4
-0.3
growth on ricinoleic acid
YNB Glucose
0.1
-0.0
-0.4
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.2
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.0
0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.1
0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.2
0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
0.2
0.2
0.3
growth on ypd
YPD
0.2
-0.1
-0.1
0.3
auxotrophy
YNB Glucose
0.5
-0.2
0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.1
-0.2
0.5
auxotrophy
YNB Glucose 75mM Arginine
0.6
-0.2
0.2
-0.2
auxotrophy
Dropout Complete
0.4
0.1
0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.7
0.2
-0.1
-0.2
growth on oleic acid
YNB Glucose
0.8
0.0
0.1
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.7
0.3
-0.2
0.4
growth on oleic acid
YNB Oleic Acid
1.0
0.0
0.2
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
1.4
0.2
0.2
-0.4
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