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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2971: 11339 - HMMPfam-Anp1-PF03452,SUPERFAMILY--SSF53448, at 684112 to 685866
11339
mRNA_2972: 11340 - K03850 ALG10 alpha-1,2-glucosyltransferase, at 686136 to 688131
11340
mRNA_2973: 11341 - K11996 MOCS3, UBA4 adenylyltransferase and sulfurtransferase, at 688176 to 690178
11341
mRNA_2974: 11342 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 690635 to 692698
11342
mRNA_2975: 11343 - KOG3072 Long chain fatty acid elongase, at 693422 to 694637
11343
Group
Condition
mRNA_2971
mRNA_2972
mRNA_2973
mRNA_2974
mRNA_2975
11339
11340
11341
11342
11343
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.1
-2.8
-0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.7
-0.7
0.3
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.1
-1.2
-0.4
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
-0.5
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
0.2
-0.6
0.2
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.1
-0.6
-0.2
0.4
growth on ypd
YPD
-0.0
0.2
0.2
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.0
0.3
0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.0
0.2
-0.0
0.1
growth on ricinoleic acid
YNB Glucose
0.6
0.4
0.1
-0.0
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.1
-0.0
0.1
0.1
auxotrophy
YNB Glucose
0.2
0.0
0.5
-0.2
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.1
0.6
-0.2
0.2
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.1
0.7
0.2
-0.1
auxotrophy
Dropout Complete
0.3
-0.0
0.4
0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
0.2
-0.0
0.2
0.1
growth on oleic acid
YNB Glucose
0.2
0.3
0.8
0.0
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.3
0.5
0.1
0.1
-0.2
growth on oleic acid
YNB Oleic Acid
0.4
0.4
1.0
0.0
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
1.2
0.3
0.7
0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
0.3
1.4
0.2
0.2
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