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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2962: 11330 - KOG3841 TEF-1 and related transcription factor, TEAD family, at 658359 to 659860
11330
mRNA_2963: 11331 - K01647 CS, gltA citrate synthase, at 660416 to 662957
11331
mRNA_2964: 11332 - K00965 galT, GALT UDPglucose--hexose-1-phosphate uridylyltransferase, at 664147 to 666205
11332
mRNA_2965: 11333 - KOG1721 FOG Zn-finger, at 666702 to 669525
11333
mRNA_2966: 11334 - KOG3238 Chloride ion current inducer protein, at 669918 to 671056
11334
Group
Condition
mRNA_2962
mRNA_2963
mRNA_2964
mRNA_2965
mRNA_2966
11330
11331
11332
11333
11334
auxotrophy
YNB Glucose
-0.7
-0.1
-0.8
auxotrophy
Dropout Complete
-0.3
0.1
-1.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-1.1
auxotrophy
YNB Glucose 75mM Methionine
-0.5
0.1
-0.9
growth on oleic acid
YNB Glucose
-0.4
-0.1
-0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.5
0.1
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.2
-1.2
growth on oleic acid
YNB Oleic Acid
-0.6
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.2
-0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
-0.6
growth on ypd
YPD
-0.0
-0.1
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.1
-0.5
growth on ricinoleic acid
YNB Glucose
-0.2
0.1
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.1
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.0
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.0
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.0
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.3
0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
0.6
0.5
-0.0
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