Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2961: 11329 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 654993 to 657914 11329 mRNA_2962: 11330 - KOG3841 TEF-1 and related transcription factor, TEAD family, at 658359 to 659860 11330 mRNA_2963: 11331 - K01647 CS, gltA citrate synthase, at 660416 to 662957 11331 mRNA_2964: 11332 - K00965 galT, GALT UDPglucose--hexose-1-phosphate uridylyltransferase, at 664147 to 666205 11332 mRNA_2965: 11333 - KOG1721 FOG Zn-finger, at 666702 to 669525 11333
Group Condition mRNA_2961 mRNA_2962 mRNA_2963 mRNA_2964 mRNA_2965
11329
11330
11331
11332
11333
auxotrophy Dropout Complete -0.7 -0.3   0.1 -1.3
auxotrophy YNB Glucose -0.5 -0.7   -0.1 -0.8
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.5   0.1 -0.9
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.1   -0.1 -1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 -0.1   -0.1 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.5   0.1 -0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.4   -0.2 -1.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.2   0.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 -0.4   0.2 -0.1
growth on oleic acid YNB Glucose -0.0 -0.4   -0.1 -0.7
growth on oleic acid YNB Oleic Acid -0.3 -0.6   -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 -0.0   0.0 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 0.2   0.1 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.1 0.2   0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.4 -0.2   0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.0 0.2   -0.2 -0.9
growth on ypd YPD 0.1 -0.0   -0.1 -0.7
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2   -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.3   0.0 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 0.6   0.5 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.1   -0.3 0.7
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