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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2958: 11326 - K17907 ATG9 autophagy-related protein 9, at 647495 to 650461
11326
mRNA_2959: 11327 - KOG4554 Protein involved in inorganic phosphate transport, at 651549 to 652747
11327
mRNA_2960: 11328 - KOG2617 Citrate synthase, at 653159 to 654002
11328
mRNA_2961: 11329 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 654993 to 657914
11329
mRNA_2962: 11330 - KOG3841 TEF-1 and related transcription factor, TEAD family, at 658359 to 659860
11330
Group
Condition
mRNA_2958
mRNA_2959
mRNA_2960
mRNA_2961
mRNA_2962
11326
11327
11328
11329
11330
auxotrophy
Dropout Complete
-0.2
-0.8
-0.7
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-1.2
-0.5
-0.4
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.1
-1.0
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
0.5
-1.1
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
-0.3
-0.5
auxotrophy
YNB Glucose
-0.0
-0.0
-0.5
-0.7
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
-0.5
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
0.6
-0.8
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
-0.3
-0.1
0.3
growth on oleic acid
YNB Oleic Acid
0.2
-0.3
-0.3
-0.6
growth on ricinoleic acid
YNB Glucose
0.1
-0.3
-0.4
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.2
-0.0
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.2
-0.6
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
0.5
-0.7
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.1
-0.4
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.3
-0.7
0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
1.0
-0.9
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.4
-0.2
-0.2
growth on ypd
YPD
-0.1
0.5
0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.1
0.8
0.0
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
1.5
0.5
0.1
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