Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2958: 11326 - K17907 ATG9 autophagy-related protein 9, at 647495 to 650461 11326 mRNA_2959: 11327 - KOG4554 Protein involved in inorganic phosphate transport, at 651549 to 652747 11327 mRNA_2960: 11328 - KOG2617 Citrate synthase, at 653159 to 654002 11328 mRNA_2961: 11329 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 654993 to 657914 11329 mRNA_2962: 11330 - KOG3841 TEF-1 and related transcription factor, TEAD family, at 658359 to 659860 11330
Group Condition mRNA_2958 mRNA_2959 mRNA_2960 mRNA_2961 mRNA_2962
11326
11327
11328
11329
11330
auxotrophy Dropout Complete -0.2   -0.8 -0.7 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -1.2   -0.5 -0.4 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0   -0.1 -1.0 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8   0.5 -1.1 0.2
auxotrophy YNB Glucose 75mM Arginine -0.1   -0.3 -0.3 -0.5
auxotrophy YNB Glucose -0.0   -0.0 -0.5 -0.7
auxotrophy YNB Glucose 75mM Methionine -0.1   -0.1 -0.5 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8   0.6 -0.8 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -1.0   -0.3 -0.1 0.3
growth on oleic acid YNB Oleic Acid 0.2   -0.3 -0.3 -0.6
growth on ricinoleic acid YNB Glucose 0.1   -0.3 -0.4 -0.2
growth on oleic acid YNB Glucose -0.1   -0.2 -0.0 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2   0.2 -0.6 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.0   0.5 -0.7 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2   -0.1 -0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1   -0.3 -0.7 0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2   1.0 -0.9 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1   0.4 -0.2 -0.2
growth on ypd YPD -0.1   0.5 0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.1   0.8 0.0 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.2   1.5 0.5 0.1
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