Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2948: 11316 - K12817 PRPF18, PRP18 pre-mRNA-splicing factor 18, at 625370 to 627125 11316 mRNA_2949: 11317 - K02267 COX6B cytochrome c oxidase subunit 6b, at 627743 to 628552 11317 mRNA_2950: 11318 - SUPERFAMILY--SSF56112, at 633038 to 634414 11318 mRNA_2951: 11319 - Hypothetical Protein, at 634900 to 635986 11319 mRNA_2952: 11320 - Hypothetical Protein, at 636542 to 638719 11320
Group Condition mRNA_2948 mRNA_2949 mRNA_2950 mRNA_2951 mRNA_2952
11316
11317
11318
11319
11320
growth on ricinoleic acid YNB Methylricinoleic Acid   -1.3 -0.1 0.3 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid   -2.1 0.4 0.4 -0.3
growth on oleic acid YNB Oleic Acid   -1.0 -0.0 0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate   -0.3 -0.4 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine   -0.5 -0.1 0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy   -0.7 0.3 -0.2 -0.1
auxotrophy YNB Glucose   -0.1 -0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.3 -0.3 0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy   0.2 -0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.4 -0.2 0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation   0.6 -0.2 0.2 -1.0
auxotrophy Dropout Complete   -0.2 -0.0 0.3 -0.5
ypd buoyancy 40 hrs Median Buoyancy   0.3 0.1 -0.3 -0.4
growth on ypd YPD   0.1 0.1 -0.2 -0.3
growth on oleic acid YNB Glucose   0.2 0.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.1 -0.1 0.0 0.2
auxotrophy YNB Glucose 75mM Arginine   0.0 0.1 0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.3 -0.2 0.3 0.2
facs on lipid accumulation Sorted No BODIPY Gate   0.2 0.2 0.1 0.1
facs on lipid accumulation Sorted Low BODIPY Gate   1.0 0.2 -0.3 0.0
growth on ricinoleic acid YNB Glucose   0.4 0.3 0.3 -0.0
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