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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2948: 11316 - K12817 PRPF18, PRP18 pre-mRNA-splicing factor 18, at 625370 to 627125
11316
mRNA_2949: 11317 - K02267 COX6B cytochrome c oxidase subunit 6b, at 627743 to 628552
11317
mRNA_2950: 11318 - SUPERFAMILY--SSF56112, at 633038 to 634414
11318
mRNA_2951: 11319 - Hypothetical Protein, at 634900 to 635986
11319
mRNA_2952: 11320 - Hypothetical Protein, at 636542 to 638719
11320
Group
Condition
mRNA_2948
mRNA_2949
mRNA_2950
mRNA_2951
mRNA_2952
11316
11317
11318
11319
11320
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.3
-0.1
0.3
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.1
0.4
0.4
-0.3
growth on oleic acid
YNB Oleic Acid
-1.0
-0.0
0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.4
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.1
0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.7
0.3
-0.2
-0.1
auxotrophy
YNB Glucose
-0.1
-0.1
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.3
0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.1
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.2
0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.6
-0.2
0.2
-1.0
auxotrophy
Dropout Complete
-0.2
-0.0
0.3
-0.5
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.1
-0.3
-0.4
growth on ypd
YPD
0.1
0.1
-0.2
-0.3
growth on oleic acid
YNB Glucose
0.2
0.1
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
0.0
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.1
0.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.2
0.3
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.2
0.1
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
1.0
0.2
-0.3
0.0
growth on ricinoleic acid
YNB Glucose
0.4
0.3
0.3
-0.0
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