Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2940: 11308 - SUPERFAMILY--SSF56300, at 604040 to 607064 11308 mRNA_2941: 11309 - BLAST IncA domain protein [Rhizoctonia solani AG-3 Rhs1AP], at 607263 to 608329 11309 mRNA_2942: 11310 - HMMPfam-VanZ like family-PF04892, at 608424 to 609485 11310 mRNA_2943: 11311 - KOG1902 Putative signal transduction protein involved in RNA splicing, at 609687 to 613545 11311 mRNA_2944: 11312 - BLAST Putative CigA protein [Rhizopus microsporus], at 614601 to 617050 11312
Group Condition mRNA_2940 mRNA_2941 mRNA_2942 mRNA_2943 mRNA_2944
11308
11309
11310
11311
11312
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.3 -0.7 -0.4 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 -0.6 0.2 -0.6 -0.4
growth on ypd YPD 0.1 -0.4 -0.1 0.0 -0.3
growth on oleic acid YNB Oleic Acid 0.0 -0.3 0.0 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.3 -0.2 -0.0 0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 0.1 0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.0 0.4 -0.0 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.0 -0.4 0.1 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.2 0.4 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.4 0.2 0.2 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 -0.2 -0.1 0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 0.1 0.0 -0.3 0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.6 0.5 0.1 0.8
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.2 0.3 0.2 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.1 0.2 -0.1 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.4 -0.3 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.2 -0.0 -0.1 0.8
growth on oleic acid YNB Glucose 0.1 0.0 0.4 0.2 -0.0
auxotrophy Dropout Complete -0.1 0.3 0.1 -0.1 0.8
auxotrophy YNB Glucose 0.1 0.3 0.3 0.1 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.4 0.3 0.1 1.7
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