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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2911: 11279 - BLAST ATP-dependent DNA helicase [Trichosporon asahii v..., at 520470 to 521587
11279
mRNA_2912: 11280 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 521953 to 523755
11280
mRNA_2913: 11281 - K13703 ABHD11 abhydrolase domain-containing protein 11, at 524044 to 525341
11281
mRNA_2914: 11282 - Hypothetical Protein, at 529916 to 530782
11282
mRNA_2915: 11283 - Hypothetical Protein, at 533180 to 533383
11283
Group
Condition
mRNA_2911
mRNA_2912
mRNA_2913
mRNA_2914
mRNA_2915
11279
11280
11281
11282
11283
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.8
-0.4
-2.5
0.1
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
-1.3
0.4
-0.3
-0.4
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.1
-0.7
0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.4
-0.6
-0.2
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.2
-0.2
0.3
-0.4
growth on oleic acid
YNB Glucose
0.2
-0.1
-0.7
-0.2
0.6
auxotrophy
Dropout Complete
0.2
-0.2
-0.1
0.3
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.1
-0.3
0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.4
0.3
-0.1
-0.1
-0.3
auxotrophy
YNB Glucose
0.7
0.2
-0.8
0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
0.0
-0.1
0.0
0.2
growth on ricinoleic acid
YNB Glucose
0.0
0.3
-0.9
0.1
0.8
ypd buoyancy
40 hrs Low Buoyancy
0.5
0.0
-0.3
0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.3
0.2
0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
-0.4
1.0
0.2
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
0.3
-0.5
-0.1
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
-0.0
-0.1
-0.2
0.7
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
0.1
-0.1
1.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.3
-0.3
-0.3
1.1
growth on ypd
YPD
0.5
-0.0
0.4
0.1
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
0.6
-0.5
0.3
1.4
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