Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2910: 11278 - K03657 uvrD, pcrA DNA helicase II / ATP-dependent DNA helicase PcrA, at 517093 to 520320 11278 mRNA_2911: 11279 - BLAST ATP-dependent DNA helicase [Trichosporon asahii v..., at 520470 to 521587 11279 mRNA_2912: 11280 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 521953 to 523755 11280 mRNA_2913: 11281 - K13703 ABHD11 abhydrolase domain-containing protein 11, at 524044 to 525341 11281 mRNA_2914: 11282 - Hypothetical Protein, at 529916 to 530782 11282
Group Condition mRNA_2910 mRNA_2911 mRNA_2912 mRNA_2913 mRNA_2914
11278
11279
11280
11281
11282
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.8 -0.4 -2.5 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 -0.4 -0.6 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -1.3 0.4 -0.3 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.3 -0.1 -0.7 0.2
growth on oleic acid YNB Glucose 0.2 0.2 -0.1 -0.7 -0.2
growth on ricinoleic acid YNB Glucose 0.2 0.0 0.3 -0.9 0.1
growth on oleic acid YNB Oleic Acid 0.1 -0.1 -0.1 0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 0.2 0.0 -0.1 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.1 -0.2 -0.2 0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.5 0.3 -0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.3 0.3 -0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.5 -0.0 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.4 0.3 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.5 0.0 -0.3 0.2
auxotrophy Dropout Complete 0.1 0.2 -0.2 -0.1 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.3 0.1 -0.3 0.3
auxotrophy YNB Glucose 0.2 0.7 0.2 -0.8 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.0 0.6 -0.5 0.3
auxotrophy YNB Glucose 75mM Methionine 0.2 0.2 0.3 0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.4 -0.4 1.0 0.2
growth on ypd YPD 0.1 0.5 -0.0 0.4 0.1
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