Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2901: 11269 - KOG1289 Amino acid transporters, at 494917 to 497480 11269 mRNA_2902: 11270 - K20367 ERGIC3, ERV46 endoplasmic reticulum-Golgi intermediate compartment protein 3, at 498164 to 500409 11270 mRNA_2903: 11271 - K06662 HRAD17, RAD24 cell cycle checkpoint protein, at 500559 to 503580 11271 mRNA_2904: 11272 - K03847 ALG12 alpha-1,6-mannosyltransferase, at 503747 to 505698 11272 mRNA_2905: 11273 - Hypothetical Protein, at 505810 to 506740 11273
Group Condition mRNA_2901 mRNA_2902 mRNA_2903 mRNA_2904 mRNA_2905
11269
11270
11271
11272
11273
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.2 -0.3 -0.8 -1.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.3 -0.3 -2.4 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.5 0.2 -0.0 -0.2 -1.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.6 -0.7 -1.8 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.3 -0.5 -1.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.0 -0.0 -0.9 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 0.3 -0.1 -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.6 -0.3 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.0 -0.1 0.0 -0.1
growth on oleic acid YNB Oleic Acid 0.4 -0.1 -0.3 -0.5 0.4
growth on ypd YPD 0.0 0.2 -0.7 0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.5 0.0 -1.1 0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.1 -0.0 0.2 0.0
growth on oleic acid YNB Glucose -0.4 0.1 -0.3 0.3 0.5
auxotrophy Dropout Complete -0.1 -0.0 -0.6 0.6 1.0
auxotrophy YNB Glucose 75mM Methionine -0.0 0.2 -0.6 0.2 1.4
auxotrophy YNB Glucose 75mM Arginine -0.3 0.2 -0.4 0.2 1.4
auxotrophy YNB Glucose 0.1 -0.0 -0.8 0.6 1.3
growth on ricinoleic acid YNB Glucose 0.1 0.2 -0.4 0.7 0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 -0.0 0.3 1.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.7 0.6 -0.1 0.1 0.9
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