Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2881: 11249 - KOG0254 Predicted transporter (major facilitator superfamily), at 439393 to 442330 11249 mRNA_2882: 11250 - Hypothetical Protein, at 443067 to 444033 11250 mRNA_2883: 11251 - K16675 ZDHHC9_14_18 palmitoyltransferase ZDHHC9/14/18, at 445200 to 447494 11251 mRNA_2884: 11252 - K10838 XPC xeroderma pigmentosum group C-complementing protein, at 447802 to 451973 11252 mRNA_2885: 11253 - K20246 EGT1 L-histidine Nalpha-methyltransferase / hercynylcysteine S-oxide synthase, at 452122 to 455835 11253
Group Condition mRNA_2881 mRNA_2882 mRNA_2883 mRNA_2884 mRNA_2885
11249
11250
11251
11252
11253
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.6 0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 -0.7 0.5 -0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 -0.2 0.8 -0.4 0.1
growth on oleic acid YNB Oleic Acid -0.2 -0.3 -0.0 -0.4 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 -0.5 0.4 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.0 0.6 -1.6 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.3 0.3 -0.0 0.1
growth on ypd YPD -0.1 -0.1 -0.5 0.4 0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 0.0 -0.0 0.1 0.1
growth on ricinoleic acid YNB Glucose 0.1 -0.3 0.1 -0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.1 0.3 -1.2 0.7
ypd buoyancy 40 hrs High Buoyancy -0.0 0.2 -0.2 0.0 0.2
growth on oleic acid YNB Glucose -0.2 0.0 0.4 -0.2 0.1
auxotrophy Dropout Complete -0.1 0.7 -0.3 -0.1 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.4 0.4 -0.1 0.1
auxotrophy YNB Glucose -0.1 0.3 0.0 0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.3 0.0 -0.1 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.5 0.2 -0.4 0.0
auxotrophy YNB Glucose 75mM Arginine 0.2 0.2 -0.0 0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.4 0.1 -0.1 0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.2 0.2 -0.9 1.6
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