Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2877: 11245 - Hypothetical Protein, at 429678 to 431024 11245 mRNA_2878: 11246 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 431152 to 434004 11246 mRNA_2879: 11247 - HMMPfam-Protein of unknown function (DUF3237)-PF11578, at 434192 to 435080 11247 mRNA_2880: 11248 - K10531 pvdA L-ornithine N5-oxygenase, at 436140 to 438445 11248 mRNA_2881: 11249 - KOG0254 Predicted transporter (major facilitator superfamily), at 439393 to 442330 11249
Group Condition mRNA_2877 mRNA_2878 mRNA_2879 mRNA_2880 mRNA_2881
11245
11246
11247
11248
11249
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.3 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.4 0.3 -0.1 -0.5
growth on ypd YPD -0.2 -0.2 -0.0 0.0 -0.1
auxotrophy YNB Glucose 0.2 -0.1 -0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.1 0.7 -0.2 -0.6
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 0.3 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.3 -0.2 -0.2 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.0 -0.4 -0.1 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.2 0.8 -0.0 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.1 0.8 0.1 -0.7
growth on oleic acid YNB Glucose 0.1 -0.2 0.6 -0.1 -0.2
auxotrophy Dropout Complete -0.1 0.1 0.5 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.1 1.6 -0.2 -1.3
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.2 -0.4 0.3 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.1 -0.2 0.2 0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 0.0 0.3 -0.1 0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 0.2 0.4 0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 0.8 0.2 -0.1
growth on ricinoleic acid YNB Glucose 0.4 -0.3 0.9 0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.2 1.0 0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.2 0.9 0.2 0.2
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