Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2876: 11244 - K18715 NUP159 nucleoporin NUP159, at 422380 to 429450 11244 mRNA_2877: 11245 - Hypothetical Protein, at 429678 to 431024 11245 mRNA_2878: 11246 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 431152 to 434004 11246 mRNA_2879: 11247 - HMMPfam-Protein of unknown function (DUF3237)-PF11578, at 434192 to 435080 11247 mRNA_2880: 11248 - K10531 pvdA L-ornithine N5-oxygenase, at 436140 to 438445 11248
Group Condition mRNA_2876 mRNA_2877 mRNA_2878 mRNA_2879 mRNA_2880
11244
11245
11246
11247
11248
growth on ypd YPD -0.2 -0.2 -0.2 -0.0 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.2 0.0 -0.4 -0.1
growth on oleic acid YNB Oleic Acid 0.5 -0.1 -0.1 -0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.8 -0.1 0.2 0.4 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.1 0.1 0.8 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 0.1 0.1 1.6 -0.2
auxotrophy YNB Glucose 0.8 0.2 -0.1 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.0 -0.1 0.8 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.5 0.1 0.2 -0.4 0.3
auxotrophy Dropout Complete 0.4 -0.1 0.1 0.5 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.9 0.1 -0.4 0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.6 -0.1 -0.0 0.3 -0.1
growth on oleic acid YNB Glucose 0.4 0.1 -0.2 0.6 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 0.0 -0.2 0.8 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 -0.2 0.1 0.7 -0.2
auxotrophy YNB Glucose 75mM Arginine 1.0 0.1 0.0 0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 1.7 -0.1 0.3 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.5 -0.3 0.2 1.0 0.2
growth on ricinoleic acid YNB Glucose 1.3 0.4 -0.3 0.9 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 2.1 0.4 -0.1 -0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 2.3 0.3 -0.2 0.9 0.2
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