Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2874: 11242 - K00555 TRMT1, trm1 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase, at 417421 to 420167 11242 mRNA_2875: 11243 - HMMPfam-NMT1/THI5 like-PF09084,SUPERFAMILY--SSF53850, at 420566 to 422079 11243 mRNA_2876: 11244 - K18715 NUP159 nucleoporin NUP159, at 422380 to 429450 11244 mRNA_2877: 11245 - Hypothetical Protein, at 429678 to 431024 11245 mRNA_2878: 11246 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 431152 to 434004 11246
Group Condition mRNA_2874 mRNA_2875 mRNA_2876 mRNA_2877 mRNA_2878
11242
11243
11244
11245
11246
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 -0.5 -0.1 0.2 0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.2 -1.0 0.1 0.1
growth on oleic acid YNB Glucose -1.3 0.1 0.4 0.1 -0.2
growth on oleic acid YNB Oleic Acid -1.1 -0.0 0.5 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -1.2 -0.3 0.5 0.1 0.2
auxotrophy YNB Glucose 75mM Arginine -1.3 -0.0 1.0 0.1 0.0
ypd buoyancy 40 hrs High Buoyancy 0.7 -0.2 -0.8 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.2 -0.1 0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy 1.0 -0.2 -0.4 -0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.1 0.5 -0.3 0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 0.6 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.1 0.9 0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.8 -0.3 1.7 -0.1 0.3
growth on ricinoleic acid YNB Glucose -0.7 0.1 1.3 0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 -0.1 0.7 -0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.7 -0.1 0.5 0.0 -0.2
auxotrophy Dropout Complete 0.9 -0.2 0.4 -0.1 0.1
growth on ypd YPD 1.7 -0.0 -0.2 -0.2 -0.2
auxotrophy YNB Glucose 0.3 -0.0 0.8 0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.1 2.1 0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.2 2.3 0.3 -0.2
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