Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2870: 11238 - SUPERFAMILY--SSF64182, at 409148 to 410896 11238 mRNA_2871: 11239 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 411310 to 412108 11239 mRNA_2872: 11240 - HMMPfam-Pyridine nucleotide-disulphide oxidoreductase-PF00070,PRINTS-FAD-dependent pyridine nucleotide reductase signature-PR00368,PRINTS-Pyridine nucleotide disulphide reductase class-I signature-PR00411,SUPERFAMILY--SSF51905, at 412487 to 414015 11240 mRNA_2873: 11241 - HMMPfam-Yeast cortical protein KAR9-PF08580,ProSiteProfiles-GAR domain profile.-PS51460,SUPERFAMILY--SSF143575, at 414211 to 417159 11241 mRNA_2874: 11242 - K00555 TRMT1, trm1 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase, at 417421 to 420167 11242
Group Condition mRNA_2870 mRNA_2871 mRNA_2872 mRNA_2873 mRNA_2874
11238
11239
11240
11241
11242
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.1 -0.5 -0.0 -1.2
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.1 0.0 0.2 -1.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.4 0.1 -0.0 -1.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.3 -0.4 0.3 -0.8
growth on oleic acid YNB Glucose -0.1 0.1 -0.0 0.2 -1.3
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 -0.1 0.1 -0.1
growth on ricinoleic acid YNB Glucose 0.5 -0.2 -0.1 -0.0 -0.7
growth on oleic acid YNB Oleic Acid 0.1 0.5 -0.2 0.2 -1.1
auxotrophy YNB Glucose -0.4 -0.2 0.0 -0.1 0.3
auxotrophy Dropout Complete -0.5 -0.2 -0.2 -0.1 0.9
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 -0.1 0.1 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 -0.0 0.2 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 0.1 0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2 0.1 0.1 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6 -0.3 -0.0 0.0 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.2 0.1 -0.1 0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.3 0.4 0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.0 0.3 0.3 0.4
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1 0.1 -0.2 1.0
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.0 0.1 0.1 0.7
growth on ypd YPD -0.0 0.1 0.2 0.1 1.7
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