Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2866: 11234 - ProSiteProfiles-Myb-like domain profile.-PS50090,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 397410 to 402844 11234 mRNA_2867: 11235 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 403264 to 404865 11235 mRNA_2868: 11236 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 405461 to 407348 11236 mRNA_2869: 11237 - KOG4170 2-enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/Peroxisomal 3-ketoacyl-CoA-thiolase, sterol-binding domain and related enzymes, at 407863 to 408924 11237 mRNA_2870: 11238 - SUPERFAMILY--SSF64182, at 409148 to 410896 11238
Group Condition mRNA_2866 mRNA_2867 mRNA_2868 mRNA_2869 mRNA_2870
11234
11235
11236
11237
11238
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.3 0.0 0.1 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.2 -0.4 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 -0.3 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.0 -0.3 -0.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.3 -0.2 -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.5 -0.3 -0.1 0.6
growth on ypd YPD -0.0 -0.1 0.2 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.1 -0.1 0.0 -0.1
growth on ricinoleic acid YNB Glucose 0.0 -0.3 -0.1 -0.3 0.5
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.2 0.1 0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.5 -0.1 -0.1 -0.2
auxotrophy YNB Glucose 0.1 -0.0 0.1 0.1 -0.4
growth on oleic acid YNB Oleic Acid -0.2 -0.2 0.2 -0.1 0.1
auxotrophy Dropout Complete 0.1 -0.2 0.3 0.2 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.3 0.3 0.4 -0.4
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.0 0.1 -0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.4 0.1 -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 -0.2 0.1 0.2
growth on oleic acid YNB Glucose -0.1 0.2 0.4 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.3 -0.1 0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.5 0.2 0.1 -0.2
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