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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2864: 11232 - KOG2699 Predicted ubiquitin regulatory protein, at 393832 to 395067
11232
mRNA_2865: 11233 - SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717, at 395366 to 397041
11233
mRNA_2866: 11234 - ProSiteProfiles-Myb-like domain profile.-PS50090,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 397410 to 402844
11234
mRNA_2867: 11235 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 403264 to 404865
11235
mRNA_2868: 11236 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 405461 to 407348
11236
Group
Condition
mRNA_2864
mRNA_2865
mRNA_2866
mRNA_2867
mRNA_2868
11232
11233
11234
11235
11236
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.8
-0.2
-0.5
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-1.0
-0.1
0.0
-0.3
auxotrophy
YNB Glucose
-0.7
-0.4
0.1
-0.0
0.1
growth on ricinoleic acid
YNB Glucose
-0.2
-0.1
0.0
-0.3
-0.1
auxotrophy
Dropout Complete
-0.4
-0.5
0.1
-0.2
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
0.0
-0.3
0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.5
-0.0
-0.3
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.3
0.1
-0.2
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.4
-0.1
-0.3
0.0
growth on oleic acid
YNB Oleic Acid
-0.3
0.2
-0.2
-0.2
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.5
-0.1
-0.0
-0.3
growth on oleic acid
YNB Glucose
-0.0
-0.6
-0.1
0.2
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
0.4
-0.2
0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.1
0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.6
-0.1
0.2
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.7
0.2
0.4
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.2
0.1
-0.0
0.1
growth on ypd
YPD
-0.1
0.3
-0.0
-0.1
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.4
0.3
0.1
0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.6
0.1
-0.2
0.5
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
0.6
0.0
0.5
0.2
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