Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2862: 11230 - PRINTS-Proline rich extensin signature-PR01217, at 389979 to 392232 11230 mRNA_2863: 11231 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 392445 to 393702 11231 mRNA_2864: 11232 - KOG2699 Predicted ubiquitin regulatory protein, at 393832 to 395067 11232 mRNA_2865: 11233 - SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717, at 395366 to 397041 11233 mRNA_2866: 11234 - ProSiteProfiles-Myb-like domain profile.-PS50090,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 397410 to 402844 11234
Group Condition mRNA_2862 mRNA_2863 mRNA_2864 mRNA_2865 mRNA_2866
11230
11231
11232
11233
11234
growth on oleic acid YNB Glucose -0.1 -1.3 -0.0 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.8 -0.5 0.0 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -0.7 0.3 -0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 0.2 -0.2 -1.0 -0.1
auxotrophy YNB Glucose 0.0 -0.6 -0.7 -0.4 0.1
auxotrophy Dropout Complete -0.5 0.2 -0.4 -0.5 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 0.0 -0.7 0.2
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.2 -0.2 -0.5 -0.0
growth on oleic acid YNB Oleic Acid 0.1 -0.5 -0.3 0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.0 -0.1 -0.8 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.3 -0.3 0.6 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.0 0.0 -0.4 -0.3 0.1
growth on ypd YPD 0.1 -0.7 -0.1 0.3 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.3 -0.2 0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.4 -0.2 0.5 -0.1
growth on ricinoleic acid YNB Glucose 0.2 0.1 -0.2 -0.1 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.5 0.6 0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.4 -0.4 0.4 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.2 0.3 -0.4 0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.7 0.6 0.0 0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.7 0.4 0.6 0.0
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