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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2859: 11227 - Hypothetical Protein, at 385402 to 386720
11227
mRNA_2860: 11228 - K11811 arsH arsenical resistance protein ArsH, at 387053 to 388029
11228
mRNA_2861: 11229 - KOG4754 Predicted phosphoglycerate mutase, at 388346 to 389336
11229
mRNA_2862: 11230 - PRINTS-Proline rich extensin signature-PR01217, at 389979 to 392232
11230
mRNA_2863: 11231 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 392445 to 393702
11231
Group
Condition
mRNA_2859
mRNA_2860
mRNA_2861
mRNA_2862
mRNA_2863
11227
11228
11229
11230
11231
growth on oleic acid
YNB Glucose
0.0
0.1
-0.1
-1.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
0.4
-0.5
-0.8
auxotrophy
YNB Glucose
-0.2
-0.2
0.0
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
0.6
-0.9
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.1
0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
0.4
-0.5
-0.3
auxotrophy
Dropout Complete
-0.2
-0.1
-0.5
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-1.4
0.2
0.7
growth on oleic acid
YNB Oleic Acid
-0.1
0.1
0.1
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.0
0.0
-0.2
growth on ypd
YPD
0.1
0.2
0.1
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
0.2
-0.5
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.3
0.0
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
0.6
-0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
0.5
0.3
-0.5
growth on ricinoleic acid
YNB Glucose
-0.1
0.0
0.2
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
0.2
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.0
0.3
0.0
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.3
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.0
0.1
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.1
0.7
0.6
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