Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2857: 11225 - K11247 SH3GL endophilin-A, at 382503 to 383665 11225 mRNA_2858: 11226 - HMMPfam-Translocon-associated protein (TRAP), alpha subunit-PF03896, at 383912 to 385065 11226 mRNA_2859: 11227 - Hypothetical Protein, at 385402 to 386720 11227 mRNA_2860: 11228 - K11811 arsH arsenical resistance protein ArsH, at 387053 to 388029 11228 mRNA_2861: 11229 - KOG4754 Predicted phosphoglycerate mutase, at 388346 to 389336 11229
Group Condition mRNA_2857 mRNA_2858 mRNA_2859 mRNA_2860 mRNA_2861
11225
11226
11227
11228
11229
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 -0.1 -0.1 -1.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.3 -0.4 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 -0.2 0.1 0.0  
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.3 -0.0 0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.1 -0.4 0.4  
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.3 -0.2 -0.1  
growth on ricinoleic acid YNB Glucose -0.2 0.1 -0.1 0.0  
growth on oleic acid YNB Oleic Acid -0.0 -0.2 -0.1 0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.1 -0.2 0.0  
growth on ypd YPD 0.1 -0.5 0.1 0.2  
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.3 0.0 0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.4 -0.2 0.4  
auxotrophy YNB Glucose 0.4 0.1 -0.2 -0.2  
auxotrophy Dropout Complete 0.4 0.2 -0.2 -0.1  
auxotrophy YNB Glucose 75mM Arginine 0.3 0.1 -0.1 -0.0  
growth on oleic acid YNB Glucose 0.4 -0.1 0.0 0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.1 -0.0 0.6  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.3 -0.0 0.5  
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.2 0.3 0.3  
auxotrophy YNB Glucose 75mM Methionine 0.7 0.2 0.2 -0.3  
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.4 0.0 0.6  
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