Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2856: 11224 - K14288 XPOT exportin-T, at 377812 to 382012 11224 mRNA_2857: 11225 - K11247 SH3GL endophilin-A, at 382503 to 383665 11225 mRNA_2858: 11226 - HMMPfam-Translocon-associated protein (TRAP), alpha subunit-PF03896, at 383912 to 385065 11226 mRNA_2859: 11227 - Hypothetical Protein, at 385402 to 386720 11227 mRNA_2860: 11228 - K11811 arsH arsenical resistance protein ArsH, at 387053 to 388029 11228
Group Condition mRNA_2856 mRNA_2857 mRNA_2858 mRNA_2859 mRNA_2860
11224
11225
11226
11227
11228
ypd buoyancy 40 hrs No Buoyancy Separation   -1.4 -0.1 -0.1 -1.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.6 -0.3 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.7 -0.2 0.1 0.0
growth on ricinoleic acid YNB Ricinoleic Acid   -0.5 -0.3 -0.0 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.5 -0.1 -0.4 0.4
ypd buoyancy 40 hrs High Buoyancy   0.3 -0.3 -0.2 -0.1
growth on ricinoleic acid YNB Glucose   -0.2 0.1 -0.1 0.0
growth on oleic acid YNB Oleic Acid   -0.0 -0.2 -0.1 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   0.0 -0.1 -0.2 0.0
growth on ypd YPD   0.1 -0.5 0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy   0.2 -0.3 0.0 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.3 -0.4 -0.2 0.4
auxotrophy YNB Glucose   0.4 0.1 -0.2 -0.2
auxotrophy Dropout Complete   0.4 0.2 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine   0.3 0.1 -0.1 -0.0
growth on oleic acid YNB Glucose   0.4 -0.1 0.0 0.1
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 0.1 -0.0 0.6
facs on lipid accumulation Sorted High BODIPY Gate   -0.1 0.3 -0.0 0.5
ypd buoyancy 40 hrs Low Buoyancy   0.3 -0.2 0.3 0.3
auxotrophy YNB Glucose 75mM Methionine   0.7 0.2 0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate   0.1 0.4 0.0 0.6
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