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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2854: 11222 - KOG2084 Predicted histone tail methylase containing SET domain, at 371099 to 373142
11222
mRNA_2855: 11223 - K10747 LIG1 DNA ligase 1, at 373741 to 377451
11223
mRNA_2856: 11224 - K14288 XPOT exportin-T, at 377812 to 382012
11224
mRNA_2857: 11225 - K11247 SH3GL endophilin-A, at 382503 to 383665
11225
mRNA_2858: 11226 - HMMPfam-Translocon-associated protein (TRAP), alpha subunit-PF03896, at 383912 to 385065
11226
Group
Condition
mRNA_2854
mRNA_2855
mRNA_2856
mRNA_2857
mRNA_2858
11222
11223
11224
11225
11226
ypd buoyancy
40 hrs No Buoyancy Separation
-1.4
-1.4
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.6
-0.3
growth on ypd
YPD
-0.5
0.1
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.7
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.5
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.5
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
0.3
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.3
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.3
-0.2
growth on ricinoleic acid
YNB Glucose
0.0
-0.2
0.1
growth on oleic acid
YNB Oleic Acid
0.1
-0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.1
0.3
auxotrophy
YNB Glucose
0.1
0.4
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.1
0.4
auxotrophy
Dropout Complete
0.2
0.4
0.2
growth on oleic acid
YNB Glucose
0.5
0.4
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.3
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.7
0.2
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