Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2854: 11222 - KOG2084 Predicted histone tail methylase containing SET domain, at 371099 to 373142 11222 mRNA_2855: 11223 - K10747 LIG1 DNA ligase 1, at 373741 to 377451 11223 mRNA_2856: 11224 - K14288 XPOT exportin-T, at 377812 to 382012 11224 mRNA_2857: 11225 - K11247 SH3GL endophilin-A, at 382503 to 383665 11225 mRNA_2858: 11226 - HMMPfam-Translocon-associated protein (TRAP), alpha subunit-PF03896, at 383912 to 385065 11226
Group Condition mRNA_2854 mRNA_2855 mRNA_2856 mRNA_2857 mRNA_2858
11222
11223
11224
11225
11226
ypd buoyancy 40 hrs No Buoyancy Separation -1.4     -1.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1     -0.6 -0.3
growth on ypd YPD -0.5     0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0     -0.7 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2     -0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1     -0.5 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2     0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2     0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.2     0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2     0.3 -0.2
growth on ricinoleic acid YNB Glucose 0.0     -0.2 0.1
growth on oleic acid YNB Oleic Acid 0.1     -0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1     -0.1 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4     0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.2     -0.1 0.3
auxotrophy YNB Glucose 0.1     0.4 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1     0.1 0.4
auxotrophy Dropout Complete 0.2     0.4 0.2
growth on oleic acid YNB Glucose 0.5     0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.4     0.3 0.1
auxotrophy YNB Glucose 75mM Methionine 0.2     0.7 0.2
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