Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_2847: 11215 - ProSitePatterns-Zinc finger RING-type signature.-PS00518, at 351577 to 353493 11215 mRNA_2848: 11216 - HMMPfam-GMC oxidoreductase-PF00732,HMMPfam-GMC oxidoreductase-PF05199,PIRSF--PIRSF000137,ProSitePatterns-GMC oxidoreductases signature 2.-PS00624,SUPERFAMILY--SSF51905,SUPERFAMILY--SSF54373, at 354444 to 356897 11216 mRNA_2849: 11217 - K01611 speD, AMD1 S-adenosylmethionine decarboxylase, at 358278 to 359885 11217 mRNA_2850: 11218 - SUPERFAMILY--SSF52047, at 360186 to 362999 11218 mRNA_2851: 11219 - SUPERFAMILY--SSF52047, at 363401 to 364630 11219
Group Condition mRNA_2847 mRNA_2848 mRNA_2849 mRNA_2850 mRNA_2851
11215
11216
11217
11218
11219
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 -0.1   0.0 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.1 0.1   -0.0 -0.3
growth on ypd YPD -0.6 0.3   -0.2 -0.2
auxotrophy Dropout Complete -0.7 -0.1   0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.1   0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1   0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1   -0.1 0.1
growth on oleic acid YNB Glucose -0.2 -0.0   -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 0.1   -0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1   -0.0 0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2   0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.5 0.2   0.2 0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.1   0.1 0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 0.1   0.3 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1   -0.0 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.0   0.0 0.1
auxotrophy YNB Glucose -0.2 0.2   0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.1   -0.0 0.3
growth on ricinoleic acid YNB Glucose 0.2 0.0   0.2 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.5   0.0 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.5 0.1   0.0 0.7
remove
mRNA_2847
plot		 remove
mRNA_2848
plot		 remove
mRNA_2849		 remove
mRNA_2850
plot		 remove
mRNA_2851
plot