Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2845: 11213 - K14767 UTP3, SAS10 U3 small nucleolar RNA-associated protein 3, at 347032 to 349782 11213 mRNA_2846: 11214 - KOG3100 Uncharacterized conserved protein, at 349966 to 351384 11214 mRNA_2847: 11215 - ProSitePatterns-Zinc finger RING-type signature.-PS00518, at 351577 to 353493 11215 mRNA_2848: 11216 - HMMPfam-GMC oxidoreductase-PF00732,HMMPfam-GMC oxidoreductase-PF05199,PIRSF--PIRSF000137,ProSitePatterns-GMC oxidoreductases signature 2.-PS00624,SUPERFAMILY--SSF51905,SUPERFAMILY--SSF54373, at 354444 to 356897 11216 mRNA_2849: 11217 - K01611 speD, AMD1 S-adenosylmethionine decarboxylase, at 358278 to 359885 11217
Group Condition mRNA_2845 mRNA_2846 mRNA_2847 mRNA_2848 mRNA_2849
11213
11214
11215
11216
11217
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -1.1 0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.8 -0.1  
auxotrophy Dropout Complete     -0.7 -0.1  
auxotrophy YNB Glucose 75mM Methionine     -0.5 -0.1  
growth on ypd YPD     -0.6 0.3  
facs on lipid accumulation Sorted No BODIPY Gate     -0.5 0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.2 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy     -0.2 -0.1  
auxotrophy YNB Glucose 75mM Arginine     -0.3 0.1  
growth on oleic acid YNB Oleic Acid     -0.1 -0.1  
ypd buoyancy 40 hrs Median Buoyancy     -0.1 -0.1  
growth on oleic acid YNB Glucose     -0.2 -0.0  
ypd buoyancy 40 hrs High Buoyancy     -0.0 -0.2  
ypd buoyancy 40 hrs Low Buoyancy     -0.0 -0.1  
auxotrophy YNB Glucose     -0.2 0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid     0.0 0.0  
growth on ricinoleic acid YNB Ricinoleic Acid     -0.0 0.1  
growth on ricinoleic acid YNB Glucose     0.2 0.0  
facs on lipid accumulation Sorted Low BODIPY Gate     -0.1 0.5  
ypd buoyancy 40 hrs No Buoyancy Separation     0.4 0.1  
facs on lipid accumulation Sorted High BODIPY Gate     0.5 0.1  
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