Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2834: 11202 - K01001 ALG7 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, at 324460 to 326344 11202 mRNA_2835: 11203 - K00022 HADH 3-hydroxyacyl-CoA dehydrogenase, at 326503 to 328205 11203 mRNA_2836: 11204 - HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221, at 328530 to 330386 11204 mRNA_2837: 11205 - KOG4100 Uncharacterized conserved protein, at 330565 to 331429 11205 mRNA_2838: 11206 - K02934 RP-L6e, RPL6 large subunit ribosomal protein L6e, at 331899 to 332766 11206
Group Condition mRNA_2834 mRNA_2835 mRNA_2836 mRNA_2837 mRNA_2838
11202
11203
11204
11205
11206
growth on ricinoleic acid YNB Ricinoleic Acid   -1.9 0.1 -0.8  
growth on oleic acid YNB Oleic Acid   -1.3 -0.1 -0.8  
growth on ricinoleic acid YNB Methylricinoleic Acid   -1.3 0.3 -0.9  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.6 -0.1 -0.7  
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.6 -0.3 -0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.8 -0.2 -0.1  
growth on oleic acid YNB Glucose   -0.3 -0.2 -0.4  
facs on lipid accumulation Sorted High BODIPY Gate   -0.4 0.4 -0.7  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.6 -0.2 0.2  
facs on lipid accumulation Sorted Low BODIPY Gate   -0.5 -0.1 0.0  
facs on lipid accumulation Sorted No BODIPY Gate   -0.4 0.1 -0.1  
auxotrophy YNB Glucose 75mM Arginine   -0.1 -0.1 -0.2  
ypd buoyancy 40 hrs Low Buoyancy   -0.3 0.2 -0.2  
ypd buoyancy 40 hrs High Buoyancy   -0.0 -0.0 -0.2  
auxotrophy Dropout Complete   -0.1 0.2 -0.3  
ypd buoyancy 40 hrs Median Buoyancy   0.1 -0.1 0.0  
ypd buoyancy 40 hrs No Buoyancy Separation   -0.0 0.3 -0.2  
auxotrophy YNB Glucose 75mM Methionine   0.1 0.1 0.1  
auxotrophy YNB Glucose   0.2 0.0 0.1  
growth on ricinoleic acid YNB Glucose   -0.1 0.3 0.2  
growth on ypd YPD   0.2 0.4 0.5  
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